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    Inadequate taxonomy and highly divergent COI haplotypes in laboratory and field populations of earthworms used in ecotoxicology. A case study

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    2013Inadequate_taxanomy.pdf (259.7Kb)
    Date
    2013
    Author
    Voua Otomo, Patricks
    Maboeta, Mark S.
    Bezuidenhout, Carlos
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    Abstract
    DNA barcoding was used to investigate the phylogenetic delimitations of Eisenia sp field populations and laboratory cultures used in ecotoxicological research in South Africa. A total of three focal groups (used in published works) and two non-focal groups were assessed. These focal groups, including two laboratory cultures and one field population, have been referred to as Eisenia fetida in the literature. Phylogenetic analyses of the COI gene revealed that the taxonomy of these Eisenia sp had been incorrectly assigned since all the generated sequences grouped unequivocally with published sequences of E. andrei. Very high sequence divergence (> 25% K2P) found within E. andrei could signal the occurrence of hitherto non-described cryptic species. These findings are discussed with an emphasis on the possible consequences of using conspecific earthworms specimens with high molecular divergence in ecotoxicological bioassays. It is not clear whether unbeknownst to the researcher, the use of cryptic species in bioassays could jeopardise the quality of ecotoxicological investigations. Early evidence suggests that cryptic oligochaete species may respond differently to metal toxicity. The need for comparative ecotoxicological studies between E. andrei and E. fetida is also evidenced, especially in the light of recent numerous reports of cryptic oligochaete species. Ecotoxicologists are consequently encouraged, whenever possible, to make use of available genomic technologies to screen their laboratory stocks and available field populations for any molecular distinctiveness.
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    http://hdl.handle.net/10394/13554
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    • Faculty of Natural and Agricultural Sciences [4817]

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